Title: Light-driven post-translational installation of reactive protein side chains

Authors (19): B. Josephson, C. Fehl, P. G. Isenegger, S. Nadal, T. H. Wright, A. W. J. .Poh, B. J. Bower, A. M. Giltrap, L. Chen, C. Batchelor-McAuley, G. Roper, O. Arisa, J. B. I. .Sap, A. Kawamura, A. J. Baldwin, S. Mohammed, R. G. Compton, V. Gouverneur, B. G. Davis

Themes: Transformations (2020)

DOI: 10.1038/s41586-020-2733-7

Citations: 115

Pub type: article-journal

Publisher: Springer Science and Business Media LLC

Issue: 7826

License: [{"URL"=>"http://www.springer.com/tdm", "start"=>{"date-parts"=>[[2020, 9, 23]], "date-time"=>"2020-09-23T00:00:00Z", "timestamp"=>1600819200000}, "delay-in-days"=>0, "content-version"=>"tdm"}, {"URL"=>"http://www.springer.com/tdm", "start"=>{"date-parts"=>[[2020, 9, 23]], "date-time"=>"2020-09-23T00:00:00Z", "timestamp"=>1600819200000}, "delay-in-days"=>0, "content-version"=>"vor"}]

Publication date(s): 2020/09/24 (print) 2020/09/23 (online)

Pages: 530-537

Volume: 585 Issue: 7826

Journal: Nature

Link: [{"URL"=>"http://www.nature.com/articles/s41586-020-2733-7.pdf", "content-type"=>"application/pdf", "content-version"=>"vor", "intended-application"=>"text-mining"}, {"URL"=>"http://www.nature.com/articles/s41586-020-2733-7", "content-type"=>"text/html", "content-version"=>"vor", "intended-application"=>"text-mining"}, {"URL"=>"http://www.nature.com/articles/s41586-020-2733-7.pdf", "content-type"=>"application/pdf", "content-version"=>"vor", "intended-application"=>"similarity-checking"}]

URL: http://dx.doi.org/10.1038/s41586-020-2733-7

Post-translational modifications (PTMs) greatly expand the structures and functions of proteins in nature1,2. Although synthetic protein functionalization strategies allow mimicry of PTMs3,4, as well as formation of unnatural protein variants with diverse potential functions, including drug carrying5, tracking, imaging6 and partner crosslinking7, the range of functional groups that can be introduced remains limited. Here we describe the visible-light-driven installation of side chains at dehydroalanine residues in proteins through the formation of carbon-centred radicals that allow C–C bond formation in water. Control of the reaction redox allows site-selective modification with good conversions and reduced protein damage. In situ generation of boronic acid catechol ester derivatives generates RH2C• radicals that form the native (β-CH2–γ-CH2) linkage of natural residues and PTMs, whereas in situ potentiation of pyridylsulfonyl derivatives by Fe(ii) generates RF2C• radicals that form equivalent β-CH2–γ-CF2 linkages bearing difluoromethylene labels. These reactions are chemically tolerant and incorporate a wide range of functionalities (more than 50 unique residues/side chains) into diverse protein scaffolds and sites. Initiation can be applied chemoselectively in the presence of sensitive groups in the radical precursors, enabling installation of previously incompatible side chains. The resulting protein function and reactivity are used to install radical precursors for homolytic on-protein radical generation; to study enzyme function with natural, unnatural and CF2-labelled post-translationally modified protein substrates via simultaneous sensing of both chemo- and stereoselectivity; and to create generalized ‘alkylator proteins’ with a spectrum of heterolytic covalent-bond-forming activity (that is, reacting diversely with small molecules at one extreme or selectively with protein targets through good mimicry at the other). Post-translational access to such reactions and chemical groups on proteins could be useful in both revealing and creating protein function. A wide range of side chains are installed into proteins by addition of photogenerated alkyl or difluroalkyl radicals, providing access to new functionality and reactivity in proteins.

Name Description Publised
Data for 'Light-Driven, Posttranslation Installation of Reactive Protein Side Chains' C–C side chain alteration within intact proteins has the potential to al... 2020
Extended Data Fig. 1 Overview of radical side-chain installation and relevant previous literature. Extended Data Fig. 1 Overview of radical side-chain installation and rel... 2020
Extended Data Fig. 2 Complementary strategies for mild protein-compatible photoredox reactions. Extended Data Fig. 2 Complementary strategies for mild protein-compatibl... 2020
Extended Data Fig. 3 Investigation and optimization of BACED chemistry. Extended Data Fig. 3 Investigation and optimization of BACED chemistry.... 2020
Extended Data Fig. 4 Mechanistic investigation of the role of catechol in BACED reactions. Extended Data Fig. 4 Mechanistic investigation of the role of catechol i... 2020
Extended Data Fig. 5 Initial experiments without iron using various hydride sources, and optimization study with sodium borohydride for pySOOF. Extended Data Fig. 5 Initial experiments without iron using various hydr... 2020
Extended Data Fig. 6 Optimization study of Fe(ii)-mediated protein modification reaction with pySOOF. Extended Data Fig. 6 Optimization study of Fe(ii)-mediated protein modif... 2020
Extended Data Fig. 7 Investigations on pySOOF reagent reactivity and on-protein mechanism. Extended Data Fig. 7 Investigations on pySOOF reagent reactivity and on-... 2020
Extended Data Fig. 8 Substrate scopes for BACED and pySOOF. Extended Data Fig. 8 Substrate scopes for BACED and pySOOF.... 2020
Extended Data Fig. 9 Upscaling of the protein modification with pySOOF and 19F NMR analysis. Extended Data Fig. 9 Upscaling of the protein modification with pySOOF a... 2020
Extended Data Fig. 10 Application of difluorinated amino acid-labelled proteins in 19F NMR studies. Extended Data Fig. 10 Application of difluorinated amino acid-labelled p... 2020
Extended Data Fig. 11 Effective molarity driven protein–protein crosslinking with electrophile-containing side chains. Extended Data Fig. 11 Effective molarity driven protein–protein crosslin... 2020
Supplementary Discussion Supl. Discussion This file contains Supl. Discussion 1-6 and Supl. Note... 2020
Reporting summary Reporting summary... 2020
Supplementary Tables Supl. Tables This file contains Supl. Tables 1-37.... 2020
Supplementary Methods Supl. Methods This file contains Supl. Methods and Supl. References.... 2020
Source data Fig. 3 Source data Fig. 3... 2020
Source Data Extended Data Fig. 3 Source Data Extended Data Fig. 3... 2020
Source Data Extended Data Fig. 5 Source Data Extended Data Fig. 5... 2020
Source Data Extended Data Fig. 6 Source Data Extended Data Fig. 6... 2020


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